Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rtn4rl1Q8K0S5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rl1Q8K0S5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm22325-201ENSMUST00000158904 308 ntBASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rtn4rl1Q8K0S5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn4rl1Q8K0S5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rl1Q8K0S5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm11249-201ENSMUST00000117071 859 ntBASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rl1Q8K0S5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm7977-201ENSMUST00000193787 748 ntBASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4rl1Q8K0S5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4rl1Q8K0S5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4rl1Q8K0S5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rtn4rl1Q8K0S5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn4rl1Q8K0S5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm6576-201ENSMUST00000169678 883 ntBASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn4rl1Q8K0S5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms