Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgcs1Q8JZK9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgcs1Q8JZK9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgcs1Q8JZK9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgcs1Q8JZK9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmgcs1Q8JZK9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmgcs1Q8JZK9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgcs1Q8JZK9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Hmgcs1Q8JZK9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms