Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clip4Q8CI96 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.1■□□□□ 0.65
Clip4Q8CI96 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.1■□□□□ 0.65
Clip4Q8CI96 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clip4Q8CI96 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.09■□□□□ 0.65
Clip4Q8CI96 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Gm43060-201ENSMUST00000200621 289 ntBASIC19.09■□□□□ 0.65
Clip4Q8CI96 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clip4Q8CI96 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clip4Q8CI96 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip4Q8CI96 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Clip4Q8CI96 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clip4Q8CI96 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Gm40848-201ENSMUST00000221998 324 ntBASIC19.08■□□□□ 0.64
Clip4Q8CI96 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clip4Q8CI96 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clip4Q8CI96 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clip4Q8CI96 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clip4Q8CI96 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip4Q8CI96 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip4Q8CI96 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms