Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox30Q8CGW4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sox30Q8CGW4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Sox30Q8CGW4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Rarb-207ENSMUST00000225921 2756 ntBASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sox30Q8CGW4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox30Q8CGW4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.89■□□□□ 0.94
Sox30Q8CGW4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sox30Q8CGW4 Gm14117-201ENSMUST00000122417 843 ntBASIC20.89■□□□□ 0.93
Sox30Q8CGW4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox30Q8CGW4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox30Q8CGW4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox30Q8CGW4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox30Q8CGW4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox30Q8CGW4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.84■□□□□ 0.93
Sox30Q8CGW4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms