Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rdh1Q8CGV4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rdh1Q8CGV4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.52■□□□□ 0.55
Rdh1Q8CGV4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh1Q8CGV4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rdh1Q8CGV4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rdh1Q8CGV4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Gm13148-201ENSMUST00000118892 745 ntBASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rdh1Q8CGV4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rdh1Q8CGV4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Gm6211-202ENSMUST00000167849 925 ntBASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rdh1Q8CGV4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
Rdh1Q8CGV4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms