Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.49■■□□□ 1.19
Rbm28Q8CGC6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 Gm27011-201ENSMUST00000182352 972 ntBASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rbm28Q8CGC6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rbm28Q8CGC6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rbm28Q8CGC6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.45■■□□□ 1.19
Rbm28Q8CGC6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rbm28Q8CGC6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rbm28Q8CGC6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rbm28Q8CGC6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rbm28Q8CGC6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rbm28Q8CGC6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rbm28Q8CGC6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Mir5133-201ENSMUST00000174955 77 ntBASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbm28Q8CGC6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbm28Q8CGC6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rbm28Q8CGC6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rbm28Q8CGC6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rbm28Q8CGC6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Rbm28Q8CGC6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rbm28Q8CGC6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms