Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab43Q8CG50 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
Rab43Q8CG50 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.59■□□□□ 0.57
Rab43Q8CG50 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.59■□□□□ 0.57
Rab43Q8CG50 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab43Q8CG50 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
Rab43Q8CG50 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab43Q8CG50 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rab43Q8CG50 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rab43Q8CG50 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab43Q8CG50 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Rab43Q8CG50 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Gm13168-201ENSMUST00000121771 632 ntBASIC18.58■□□□□ 0.56
Rab43Q8CG50 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rab43Q8CG50 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rab43Q8CG50 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Gm26524-201ENSMUST00000192339 390 ntBASIC18.57■□□□□ 0.56
Rab43Q8CG50 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab43Q8CG50 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab43Q8CG50 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.56■□□□□ 0.56
Rab43Q8CG50 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.56■□□□□ 0.56
Rab43Q8CG50 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rab43Q8CG50 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Rab3c-203ENSMUST00000224180 967 ntBASIC18.55■□□□□ 0.56
Rab43Q8CG50 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab43Q8CG50 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.54■□□□□ 0.56
Rab43Q8CG50 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rab43Q8CG50 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.54■□□□□ 0.56
Rab43Q8CG50 Gm37856-201ENSMUST00000191634 999 ntBASIC18.54■□□□□ 0.56
Rab43Q8CG50 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab43Q8CG50 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.53■□□□□ 0.56
Rab43Q8CG50 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab43Q8CG50 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Trmt13-210ENSMUST00000198454 880 ntBASIC18.52■□□□□ 0.56
Rab43Q8CG50 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab43Q8CG50 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rab43Q8CG50 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab43Q8CG50 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms