Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Gm10812-201ENSMUST00000099864 546 ntBASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc17Q8CE13 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Gm6211-202ENSMUST00000167849 925 ntBASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc17Q8CE13 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc17Q8CE13 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.64■□□□□ 0.74
Ccdc17Q8CE13 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.64■□□□□ 0.74
Ccdc17Q8CE13 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.64■□□□□ 0.73
Ccdc17Q8CE13 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Gm37856-201ENSMUST00000191634 999 ntBASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc17Q8CE13 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc17Q8CE13 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc17Q8CE13 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms