Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm4894Q8CA09 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm4894Q8CA09 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm4894Q8CA09 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm4894Q8CA09 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm4894Q8CA09 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm4894Q8CA09 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm4894Q8CA09 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm4894Q8CA09 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.13■□□□□ 0.01
Gm4894Q8CA09 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm4894Q8CA09 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm4894Q8CA09 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm4894Q8CA09 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms