Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rtp1Q8C8C1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Rtp1Q8C8C1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rtp1Q8C8C1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rtp1Q8C8C1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Gm18666-201ENSMUST00000190039 958 ntBASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rtp1Q8C8C1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Gm11249-201ENSMUST00000117071 859 ntBASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Gm7860-201ENSMUST00000121190 879 ntBASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rtp1Q8C8C1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtp1Q8C8C1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtp1Q8C8C1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.83■■□□□ 1.09
Rtp1Q8C8C1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtp1Q8C8C1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rtp1Q8C8C1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rtp1Q8C8C1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rtp1Q8C8C1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Mir1199-201ENSMUST00000117015 119 ntBASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rtp1Q8C8C1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms