Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3rf2Q8BZT2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3rf2Q8BZT2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf2Q8BZT2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf2Q8BZT2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf2Q8BZT2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3rf2Q8BZT2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3rf2Q8BZT2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sh3rf2Q8BZT2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3rf2Q8BZT2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3rf2Q8BZT2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3rf2Q8BZT2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3rf2Q8BZT2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 708.4 ms