Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Gm2559-201ENSMUST00000201323 363 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Rab3c-203ENSMUST00000224180 967 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Gm14859-201ENSMUST00000117752 357 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Gm10013-201ENSMUST00000106074 672 ntBASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Chd9Q8BYH8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Gm7063-201ENSMUST00000186840 981 ntBASIC15.15■□□□□ 0.02
Chd9Q8BYH8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd9Q8BYH8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Gm43514-201ENSMUST00000198852 424 ntBASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chd9Q8BYH8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd9Q8BYH8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Gm6345-202ENSMUST00000180900 204 ntBASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd9Q8BYH8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd9Q8BYH8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Gm43183-201ENSMUST00000200632 547 ntBASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Gm6443-201ENSMUST00000203599 874 ntBASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms