Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.92■□□□□ 0.78
Trerf1Q8BXJ2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trerf1Q8BXJ2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.9■□□□□ 0.78
Trerf1Q8BXJ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trerf1Q8BXJ2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trerf1Q8BXJ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Trerf1Q8BXJ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trerf1Q8BXJ2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trerf1Q8BXJ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trerf1Q8BXJ2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trerf1Q8BXJ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trerf1Q8BXJ2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trerf1Q8BXJ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trerf1Q8BXJ2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.85■□□□□ 0.77
Trerf1Q8BXJ2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms