Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Fam43aQ8BUP8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam43aQ8BUP8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Fam43aQ8BUP8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Fam43aQ8BUP8 Gm37812-201ENSMUST00000195216 2475 ntBASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Fam43aQ8BUP8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fam43aQ8BUP8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fam43aQ8BUP8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fam43aQ8BUP8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Fst-202ENSMUST00000223640 2612 ntBASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fam43aQ8BUP8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fam43aQ8BUP8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Fam43aQ8BUP8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Fam43aQ8BUP8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fam43aQ8BUP8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fam43aQ8BUP8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms