Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Nespas-201ENSMUST00000143738 1083 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Cdk5rap1Q8BTW8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Iqck-206ENSMUST00000208658 2891 ntBASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdk5rap1Q8BTW8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdk5rap1Q8BTW8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdk5rap1Q8BTW8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm6365-201ENSMUST00000054711 744 ntBASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdk5rap1Q8BTW8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk5rap1Q8BTW8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk5rap1Q8BTW8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms