Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr3Q8BL00 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdhr3Q8BL00 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
Cdhr3Q8BL00 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdhr3Q8BL00 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdhr3Q8BL00 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr3Q8BL00 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Gm12922-201ENSMUST00000120626 809 ntBASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr3Q8BL00 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr3Q8BL00 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdhr3Q8BL00 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.54■□□□□ 0.24
Cdhr3Q8BL00 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdhr3Q8BL00 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms