Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Dio3-201ENSMUST00000097228 1449 ntBASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.34■□□□□ 0.21
Smg1Q8BKX6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smg1Q8BKX6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smg1Q8BKX6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg1Q8BKX6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Gm2559-201ENSMUST00000201323 363 ntBASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.31■□□□□ 0.2
Smg1Q8BKX6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Gm18101-201ENSMUST00000215769 548 ntBASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smg1Q8BKX6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.29■□□□□ 0.2
Smg1Q8BKX6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg1Q8BKX6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smg1Q8BKX6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smg1Q8BKX6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smg1Q8BKX6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.27■□□□□ 0.2
Smg1Q8BKX6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smg1Q8BKX6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smg1Q8BKX6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Smg1Q8BKX6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.26■□□□□ 0.19
Smg1Q8BKX6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms