Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcal1Q8BJL0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcal1Q8BJL0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcal1Q8BJL0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcal1Q8BJL0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcal1Q8BJL0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcal1Q8BJL0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcal1Q8BJL0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcal1Q8BJL0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcal1Q8BJL0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcal1Q8BJL0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcal1Q8BJL0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcal1Q8BJL0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcal1Q8BJL0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Smarcal1Q8BJL0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcal1Q8BJL0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smarcal1Q8BJL0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcal1Q8BJL0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcal1Q8BJL0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcal1Q8BJL0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcal1Q8BJL0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcal1Q8BJL0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcal1Q8BJL0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms