Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Gm2559-201ENSMUST00000201323 363 ntBASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pkhd1l1Q80ZA4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pkhd1l1Q80ZA4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pkhd1l1Q80ZA4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm10231-201ENSMUST00000181584 441 ntBASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm10175-202ENSMUST00000208752 441 ntBASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pkhd1l1Q80ZA4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pkhd1l1Q80ZA4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Gm15378-201ENSMUST00000121894 207 ntBASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pkhd1l1Q80ZA4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms