Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Prpf40bQ80W14 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Gm37856-201ENSMUST00000191634 999 ntBASIC21.97■■□□□ 1.11
Prpf40bQ80W14 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Prpf40bQ80W14 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Prpf40bQ80W14 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Prpf40bQ80W14 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40bQ80W14 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40bQ80W14 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.95■■□□□ 1.1
Prpf40bQ80W14 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.95■■□□□ 1.1
Prpf40bQ80W14 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Prpf40bQ80W14 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Prpf40bQ80W14 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Mir6236-201ENSMUST00000184437 123 ntBASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Prpf40bQ80W14 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prpf40bQ80W14 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prpf40bQ80W14 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Gm13836-201ENSMUST00000121159 501 ntBASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Prpf40bQ80W14 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf40bQ80W14 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Prpf40bQ80W14 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Trmt13-210ENSMUST00000198454 880 ntBASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prpf40bQ80W14 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prpf40bQ80W14 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms