Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Gm6211-202ENSMUST00000167849 925 ntBASIC17.54■□□□□ 0.4
Pif1Q80SX8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pif1Q80SX8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.53■□□□□ 0.4
Pif1Q80SX8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pif1Q80SX8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pif1Q80SX8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pif1Q80SX8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.51■□□□□ 0.39
Pif1Q80SX8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pif1Q80SX8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pif1Q80SX8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.5■□□□□ 0.39
Pif1Q80SX8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pif1Q80SX8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.49■□□□□ 0.39
Pif1Q80SX8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pif1Q80SX8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pif1Q80SX8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.48■□□□□ 0.39
Pif1Q80SX8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pif1Q80SX8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.48■□□□□ 0.39
Pif1Q80SX8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pif1Q80SX8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Gm13168-201ENSMUST00000121771 632 ntBASIC17.47■□□□□ 0.39
Pif1Q80SX8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pif1Q80SX8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms