Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ShprhQ7TPQ3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ShprhQ7TPQ3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
ShprhQ7TPQ3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
ShprhQ7TPQ3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC27.43■■□□□ 1.98
ShprhQ7TPQ3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC27.43■■□□□ 1.98
ShprhQ7TPQ3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
ShprhQ7TPQ3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ShprhQ7TPQ3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Gm19094-201ENSMUST00000209791 1246 ntBASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ShprhQ7TPQ3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 AC140264.2-202ENSMUST00000218746 817 ntBASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC27.4■■□□□ 1.98
ShprhQ7TPQ3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ShprhQ7TPQ3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
ShprhQ7TPQ3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 AC153881.1-201ENSMUST00000214448 284 ntBASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ShprhQ7TPQ3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 Gm10167-201ENSMUST00000150411 1479 ntBASIC27.37■■□□□ 1.97
ShprhQ7TPQ3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ShprhQ7TPQ3 Gm9484-201ENSMUST00000195892 1159 ntBASIC27.35■■□□□ 1.97
ShprhQ7TPQ3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ShprhQ7TPQ3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ShprhQ7TPQ3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ShprhQ7TPQ3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC27.33■■□□□ 1.96
ShprhQ7TPQ3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
ShprhQ7TPQ3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ShprhQ7TPQ3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Gm29994-201ENSMUST00000195495 1193 ntBASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ShprhQ7TPQ3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms