Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Npc1l1Q6T3U4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Npc1l1Q6T3U4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.94■■□□□ 1.26
Npc1l1Q6T3U4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Npc1l1Q6T3U4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Npc1l1Q6T3U4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Npc1l1Q6T3U4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Npc1l1Q6T3U4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Npc1l1Q6T3U4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Npc1l1Q6T3U4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Npc1l1Q6T3U4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Npc1l1Q6T3U4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Npc1l1Q6T3U4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Npc1l1Q6T3U4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.89■■□□□ 1.25
Npc1l1Q6T3U4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Npc1l1Q6T3U4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Npc1l1Q6T3U4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Npc1l1Q6T3U4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Npc1l1Q6T3U4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Npc1l1Q6T3U4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Npc1l1Q6T3U4 Golph3-202ENSMUST00000226517 2359 ntBASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Gm13148-201ENSMUST00000118892 745 ntBASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Npc1l1Q6T3U4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Gm7290-201ENSMUST00000104990 617 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Gm12527-201ENSMUST00000117967 564 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Gm12918-201ENSMUST00000120234 636 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Gm15710-201ENSMUST00000121821 636 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Gm5075-201ENSMUST00000196916 622 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Npc1l1Q6T3U4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Npc1l1Q6T3U4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Npc1l1Q6T3U4 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms