Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn10aQ6QIY3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn10aQ6QIY3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Gm15378-201ENSMUST00000121894 207 ntBASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn10aQ6QIY3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn10aQ6QIY3 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn10aQ6QIY3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Scn10aQ6QIY3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Scn10aQ6QIY3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn10aQ6QIY3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn10aQ6QIY3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn10aQ6QIY3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.89■■□□□ 1.09
Scn10aQ6QIY3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn10aQ6QIY3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn10aQ6QIY3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn10aQ6QIY3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn10aQ6QIY3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn10aQ6QIY3 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn10aQ6QIY3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms