Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx58Q6Q899 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.65■■□□□ 1.38
Ddx58Q6Q899 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx58Q6Q899 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx58Q6Q899 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.64■■□□□ 1.37
Ddx58Q6Q899 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx58Q6Q899 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.64■■□□□ 1.37
Ddx58Q6Q899 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
Ddx58Q6Q899 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx58Q6Q899 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ddx58Q6Q899 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ddx58Q6Q899 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Gm5408-201ENSMUST00000197998 747 ntBASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx58Q6Q899 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx58Q6Q899 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx58Q6Q899 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.59■■□□□ 1.37
Ddx58Q6Q899 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx58Q6Q899 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx58Q6Q899 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Ddx58Q6Q899 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Ddx58Q6Q899 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx58Q6Q899 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Ddx58Q6Q899 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx58Q6Q899 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx58Q6Q899 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx58Q6Q899 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx58Q6Q899 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.57■■□□□ 1.36
Ddx58Q6Q899 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms