Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm15039-201ENSMUST00000118914 875 ntBASIC21.18■□□□□ 0.98
Dhx40Q6PE54 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dhx40Q6PE54 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dhx40Q6PE54 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Dhx40Q6PE54 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Dhx40Q6PE54 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Dhx40Q6PE54 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Dhx40Q6PE54 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dhx40Q6PE54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dhx40Q6PE54 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Dhx40Q6PE54 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dhx40Q6PE54 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dhx40Q6PE54 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Gm9847-201ENSMUST00000052528 599 ntBASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.11■□□□□ 0.97
Dhx40Q6PE54 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dhx40Q6PE54 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
Dhx40Q6PE54 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms