Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim37Q6PCX9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim37Q6PCX9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim37Q6PCX9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim37Q6PCX9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim37Q6PCX9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Trim37Q6PCX9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim37Q6PCX9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Gm13148-201ENSMUST00000118892 745 ntBASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim37Q6PCX9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim37Q6PCX9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim37Q6PCX9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim37Q6PCX9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Trim37Q6PCX9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim37Q6PCX9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim37Q6PCX9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim37Q6PCX9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim37Q6PCX9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim37Q6PCX9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Gm37856-201ENSMUST00000191634 999 ntBASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim37Q6PCX9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim37Q6PCX9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim37Q6PCX9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim37Q6PCX9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms