Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtl3Q6P1Y1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtl3Q6P1Y1 Gm7860-201ENSMUST00000121190 879 ntBASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtl3Q6P1Y1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rtl3Q6P1Y1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtl3Q6P1Y1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rtl3Q6P1Y1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Gm27011-201ENSMUST00000182352 972 ntBASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Rtl3Q6P1Y1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtl3Q6P1Y1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.62■□□□□ 0.73
Rtl3Q6P1Y1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.62■□□□□ 0.73
Rtl3Q6P1Y1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtl3Q6P1Y1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtl3Q6P1Y1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rtl3Q6P1Y1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtl3Q6P1Y1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtl3Q6P1Y1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms