Protein–RNA interactions for Protein: Q6IUP1

Sohlh1, Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sohlh1Q6IUP1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sohlh1Q6IUP1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sohlh1Q6IUP1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sohlh1Q6IUP1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.53■□□□□ 0.56
Sohlh1Q6IUP1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sohlh1Q6IUP1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sohlh1Q6IUP1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sohlh1Q6IUP1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms