Protein–RNA interactions for Protein: Q64104

Nr2e1, Nuclear receptor subfamily 2 group E member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e1Q64104 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e1Q64104 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nr2e1Q64104 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr2e1Q64104 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nr2e1Q64104 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nr2e1Q64104 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr2e1Q64104 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr2e1Q64104 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e1Q64104 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e1Q64104 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr2e1Q64104 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.51■□□□□ 0.87
Nr2e1Q64104 Gm12441-201ENSMUST00000121806 588 ntBASIC20.51■□□□□ 0.87
Nr2e1Q64104 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
Nr2e1Q64104 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr2e1Q64104 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.49■□□□□ 0.87
Nr2e1Q64104 Mir6236-201ENSMUST00000184437 123 ntBASIC20.49■□□□□ 0.87
Nr2e1Q64104 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr2e1Q64104 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.48■□□□□ 0.87
Nr2e1Q64104 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.48■□□□□ 0.87
Nr2e1Q64104 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr2e1Q64104 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.47■□□□□ 0.87
Nr2e1Q64104 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr2e1Q64104 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nr2e1Q64104 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Reep4-203ENSMUST00000226563 1444 ntBASIC20.46■□□□□ 0.87
Nr2e1Q64104 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Gm7514-201ENSMUST00000209475 934 ntBASIC20.46■□□□□ 0.87
Nr2e1Q64104 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr2e1Q64104 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.45■□□□□ 0.86
Nr2e1Q64104 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr2e1Q64104 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr2e1Q64104 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr2e1Q64104 Mir5133-201ENSMUST00000174955 77 ntBASIC20.45■□□□□ 0.86
Nr2e1Q64104 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr2e1Q64104 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr2e1Q64104 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nr2e1Q64104 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr2e1Q64104 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr2e1Q64104 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr2e1Q64104 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr2e1Q64104 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr2e1Q64104 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.43■□□□□ 0.86
Nr2e1Q64104 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr2e1Q64104 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Gm27801-201ENSMUST00000184174 223 ntBASIC20.42■□□□□ 0.86
Nr2e1Q64104 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nr2e1Q64104 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr2e1Q64104 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.41■□□□□ 0.86
Nr2e1Q64104 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.41■□□□□ 0.86
Nr2e1Q64104 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms