Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six1Q62231 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.6■□□□□ 0.73
Six1Q62231 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Six1Q62231 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six1Q62231 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
Six1Q62231 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Six1Q62231 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.59■□□□□ 0.73
Six1Q62231 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.59■□□□□ 0.73
Six1Q62231 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.59■□□□□ 0.73
Six1Q62231 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Six1Q62231 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.59■□□□□ 0.73
Six1Q62231 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six1Q62231 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Six1Q62231 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Six1Q62231 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six1Q62231 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Six1Q62231 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Six1Q62231 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six1Q62231 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six1Q62231 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six1Q62231 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.57■□□□□ 0.72
Six1Q62231 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.57■□□□□ 0.72
Six1Q62231 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.57■□□□□ 0.72
Six1Q62231 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Six1Q62231 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six1Q62231 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.57■□□□□ 0.72
Six1Q62231 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.56■□□□□ 0.72
Six1Q62231 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.56■□□□□ 0.72
Six1Q62231 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.56■□□□□ 0.72
Six1Q62231 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.56■□□□□ 0.72
Six1Q62231 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six1Q62231 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.55■□□□□ 0.72
Six1Q62231 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Six1Q62231 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Six1Q62231 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six1Q62231 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.55■□□□□ 0.72
Six1Q62231 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six1Q62231 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Six1Q62231 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six1Q62231 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.54■□□□□ 0.72
Six1Q62231 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six1Q62231 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six1Q62231 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six1Q62231 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.54■□□□□ 0.72
Six1Q62231 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.54■□□□□ 0.72
Six1Q62231 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six1Q62231 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six1Q62231 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Six1Q62231 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Six1Q62231 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six1Q62231 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms