Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarcd1Q61466 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcd1Q61466 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd1Q61466 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.87■□□□□ 0.77
Smarcd1Q61466 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd1Q61466 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd1Q61466 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarcd1Q61466 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd1Q61466 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.84■□□□□ 0.77
Smarcd1Q61466 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Smarcd1Q61466 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 Gm6420-201ENSMUST00000193885 723 ntBASIC19.84■□□□□ 0.77
Smarcd1Q61466 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd1Q61466 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarcd1Q61466 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarcd1Q61466 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Smarcd1Q61466 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd1Q61466 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd1Q61466 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd1Q61466 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd1Q61466 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd1Q61466 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarcd1Q61466 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.82■□□□□ 0.76
Smarcd1Q61466 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Gm12933-201ENSMUST00000120203 872 ntBASIC19.82■□□□□ 0.76
Smarcd1Q61466 Nespas-201ENSMUST00000143738 1083 ntBASIC19.82■□□□□ 0.76
Smarcd1Q61466 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd1Q61466 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.81■□□□□ 0.76
Smarcd1Q61466 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd1Q61466 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcd1Q61466 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms