Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch1Q61115 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch1Q61115 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch1Q61115 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC27.93■■■□□ 2.06
Ptch1Q61115 Gm15847-201ENSMUST00000121417 1065 ntBASIC27.93■■■□□ 2.06
Ptch1Q61115 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch1Q61115 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
Ptch1Q61115 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC27.93■■■□□ 2.06
Ptch1Q61115 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch1Q61115 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch1Q61115 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ptch1Q61115 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC27.93■■■□□ 2.06
Ptch1Q61115 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Ptch1Q61115 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC27.92■■■□□ 2.06
Ptch1Q61115 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptch1Q61115 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Ptch1Q61115 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC27.91■■■□□ 2.06
Ptch1Q61115 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC27.91■■■□□ 2.06
Ptch1Q61115 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Gm8668-201ENSMUST00000120559 1447 ntBASIC27.91■■■□□ 2.06
Ptch1Q61115 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Gm10459-201ENSMUST00000202708 1155 ntBASIC27.91■■■□□ 2.06
Ptch1Q61115 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ptch1Q61115 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ptch1Q61115 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC27.9■■■□□ 2.06
Ptch1Q61115 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC27.9■■■□□ 2.06
Ptch1Q61115 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ptch1Q61115 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ptch1Q61115 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC27.89■■■□□ 2.06
Ptch1Q61115 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch1Q61115 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch1Q61115 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch1Q61115 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC27.89■■■□□ 2.06
Ptch1Q61115 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch1Q61115 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptch1Q61115 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
Ptch1Q61115 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptch1Q61115 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Ptch1Q61115 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptch1Q61115 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptch1Q61115 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC27.88■■■□□ 2.05
Ptch1Q61115 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Gm37035-201ENSMUST00000194809 2148 ntBASIC27.87■■■□□ 2.05
Ptch1Q61115 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Ptch1Q61115 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
Ptch1Q61115 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
Ptch1Q61115 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC27.87■■■□□ 2.05
Ptch1Q61115 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Ptch1Q61115 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ptch1Q61115 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC27.86■■■□□ 2.05
Ptch1Q61115 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ptch1Q61115 AC140264.2-202ENSMUST00000218746 817 ntBASIC27.86■■■□□ 2.05
Ptch1Q61115 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ptch1Q61115 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ptch1Q61115 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Ptch1Q61115 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ptch1Q61115 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ptch1Q61115 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ptch1Q61115 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Ptch1Q61115 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ptch1Q61115 Alkbh1-212ENSMUST00000185301 408 ntBASIC27.84■■■□□ 2.05
Ptch1Q61115 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC27.84■■■□□ 2.05
Ptch1Q61115 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptch1Q61115 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ptch1Q61115 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptch1Q61115 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC27.84■■■□□ 2.05
Ptch1Q61115 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptch1Q61115 Gm21362-201ENSMUST00000194272 928 ntBASIC27.84■■■□□ 2.05
Ptch1Q61115 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Ptch1Q61115 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC27.83■■■□□ 2.05
Ptch1Q61115 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ptch1Q61115 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ptch1Q61115 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ptch1Q61115 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ptch1Q61115 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Ptch1Q61115 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Ptch1Q61115 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms