Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a4Q60857 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.55■□□□□ 0.72
Slc6a4Q60857 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc6a4Q60857 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.54■□□□□ 0.72
Slc6a4Q60857 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.54■□□□□ 0.72
Slc6a4Q60857 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a4Q60857 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Gm6365-201ENSMUST00000054711 744 ntBASIC19.53■□□□□ 0.72
Slc6a4Q60857 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a4Q60857 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a4Q60857 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Mir5133-201ENSMUST00000174955 77 ntBASIC19.52■□□□□ 0.72
Slc6a4Q60857 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a4Q60857 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a4Q60857 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Slc6a4Q60857 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc6a4Q60857 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc6a4Q60857 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Gm13148-201ENSMUST00000118892 745 ntBASIC19.5■□□□□ 0.71
Slc6a4Q60857 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a4Q60857 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a4Q60857 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.49■□□□□ 0.71
Slc6a4Q60857 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a4Q60857 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a4Q60857 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a4Q60857 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a4Q60857 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms