Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-4Q5R1I0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-4Q5R1I0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Gm13534-201ENSMUST00000121169 513 ntBASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Gm29257-201ENSMUST00000186115 639 ntBASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-4Q5R1I0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6d-4Q5R1I0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-4Q5R1I0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav6d-4Q5R1I0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6d-4Q5R1I0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6d-4Q5R1I0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav6d-4Q5R1I0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6d-4Q5R1I0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Gm6420-201ENSMUST00000193885 723 ntBASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-4Q5R1I0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-4Q5R1I0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms