Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-1Q5R1H8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav8d-1Q5R1H8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav8d-1Q5R1H8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Gm12922-201ENSMUST00000120626 809 ntBASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav8d-1Q5R1H8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Gm9870-201ENSMUST00000063874 645 ntBASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav8d-1Q5R1H8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav8d-1Q5R1H8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Gm7143-201ENSMUST00000222811 859 ntBASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Gm9847-201ENSMUST00000052528 599 ntBASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav8d-1Q5R1H8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms