Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf43Q5NCP0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rnf43Q5NCP0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.41■□□□□ 0.7
Rnf43Q5NCP0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf43Q5NCP0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf43Q5NCP0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rnf43Q5NCP0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rnf43Q5NCP0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf43Q5NCP0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.36■□□□□ 0.69
Rnf43Q5NCP0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms