Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps13aQ5H8C4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Vps13aQ5H8C4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Vps13aQ5H8C4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps13aQ5H8C4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps13aQ5H8C4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vps13aQ5H8C4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps13aQ5H8C4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.14■□□□□ 0.66
Vps13aQ5H8C4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Vps13aQ5H8C4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.14■□□□□ 0.65
Vps13aQ5H8C4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vps13aQ5H8C4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Gm18101-201ENSMUST00000215769 548 ntBASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.12■□□□□ 0.65
Vps13aQ5H8C4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Vps13aQ5H8C4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vps13aQ5H8C4 Gm13559-201ENSMUST00000120476 863 ntBASIC19.1■□□□□ 0.65
Vps13aQ5H8C4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps13aQ5H8C4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps13aQ5H8C4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Ank2-226ENSMUST00000189368 339 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Gm17971-201ENSMUST00000190239 806 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps13aQ5H8C4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.08■□□□□ 0.65
Vps13aQ5H8C4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps13aQ5H8C4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Vps13aQ5H8C4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps13aQ5H8C4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps13aQ5H8C4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps13aQ5H8C4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps13aQ5H8C4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps13aQ5H8C4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Vps13aQ5H8C4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms