Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmem40Q4FJU9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tmem40Q4FJU9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Gm4968-201ENSMUST00000071458 858 ntBASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tmem40Q4FJU9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tmem40Q4FJU9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.16■□□□□ 0.18
Tmem40Q4FJU9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tmem40Q4FJU9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Tmem40Q4FJU9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Tmem40Q4FJU9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem40Q4FJU9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.12■□□□□ 0.17
Tmem40Q4FJU9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.11■□□□□ 0.17
Tmem40Q4FJU9 Gm5408-201ENSMUST00000197998 747 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms