Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trim80Q3V061 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.55■□□□□ 0.72
Trim80Q3V061 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim80Q3V061 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim80Q3V061 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Trim80Q3V061 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trim80Q3V061 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim80Q3V061 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.54■□□□□ 0.72
Trim80Q3V061 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.54■□□□□ 0.72
Trim80Q3V061 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim80Q3V061 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim80Q3V061 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim80Q3V061 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.53■□□□□ 0.72
Trim80Q3V061 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.53■□□□□ 0.72
Trim80Q3V061 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trim80Q3V061 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim80Q3V061 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Gm18284-201ENSMUST00000172604 624 ntBASIC19.52■□□□□ 0.72
Trim80Q3V061 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim80Q3V061 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim80Q3V061 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim80Q3V061 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.52■□□□□ 0.71
Trim80Q3V061 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim80Q3V061 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim80Q3V061 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim80Q3V061 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim80Q3V061 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.51■□□□□ 0.71
Trim80Q3V061 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim80Q3V061 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim80Q3V061 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim80Q3V061 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim80Q3V061 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim80Q3V061 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Trim80Q3V061 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim80Q3V061 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim80Q3V061 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim80Q3V061 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms