Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Naf1Q3UMQ8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.36■□□□□ 0.69
Naf1Q3UMQ8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Naf1Q3UMQ8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Naf1Q3UMQ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Naf1Q3UMQ8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Gm27011-201ENSMUST00000182352 972 ntBASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Naf1Q3UMQ8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Naf1Q3UMQ8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Naf1Q3UMQ8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Naf1Q3UMQ8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Naf1Q3UMQ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Naf1Q3UMQ8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Naf1Q3UMQ8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Naf1Q3UMQ8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Naf1Q3UMQ8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.28■□□□□ 0.68
Naf1Q3UMQ8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Naf1Q3UMQ8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms