Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Spg11Q3UHA3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Spg11Q3UHA3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Spg11Q3UHA3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.77■□□□□ 0.44
Spg11Q3UHA3 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.77■□□□□ 0.43
Spg11Q3UHA3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Spg11Q3UHA3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Spg11Q3UHA3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Spg11Q3UHA3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Spg11Q3UHA3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Spg11Q3UHA3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Gm7153-201ENSMUST00000117092 455 ntBASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Spg11Q3UHA3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Spg11Q3UHA3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Timm23-208ENSMUST00000226683 750 ntBASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Spg11Q3UHA3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Gm43514-201ENSMUST00000198852 424 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms