Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Xrra1Q3U3V8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Xrra1Q3U3V8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Xrra1Q3U3V8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Gm27801-201ENSMUST00000184174 223 ntBASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Xrra1Q3U3V8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.13■□□□□ 0.49
Xrra1Q3U3V8 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Xrra1Q3U3V8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Xrra1Q3U3V8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Xrra1Q3U3V8 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.09■□□□□ 0.49
Xrra1Q3U3V8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xrra1Q3U3V8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Xrra1Q3U3V8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
Xrra1Q3U3V8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Xrra1Q3U3V8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 374.4 ms