Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf149Q3U2C5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf149Q3U2C5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf149Q3U2C5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf149Q3U2C5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf149Q3U2C5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf149Q3U2C5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf149Q3U2C5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.02■□□□□ 0.31
Rnf149Q3U2C5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf149Q3U2C5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rnf149Q3U2C5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf149Q3U2C5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf149Q3U2C5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17■□□□□ 0.31
Rnf149Q3U2C5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17■□□□□ 0.31
Rnf149Q3U2C5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf149Q3U2C5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf149Q3U2C5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf149Q3U2C5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf149Q3U2C5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Rnf149Q3U2C5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf149Q3U2C5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf149Q3U2C5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms