Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.26■□□□□ 0.83
Nhej1Q3KNJ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nhej1Q3KNJ2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nhej1Q3KNJ2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nhej1Q3KNJ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nhej1Q3KNJ2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nhej1Q3KNJ2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nhej1Q3KNJ2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nhej1Q3KNJ2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nhej1Q3KNJ2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nhej1Q3KNJ2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms