Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.31■□□□□ 0.2
Smn1P97801 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smn1P97801 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.31■□□□□ 0.2
Smn1P97801 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smn1P97801 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smn1P97801 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smn1P97801 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.3■□□□□ 0.2
Smn1P97801 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Smn1P97801 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.3■□□□□ 0.2
Smn1P97801 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.3■□□□□ 0.2
Smn1P97801 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.3■□□□□ 0.2
Smn1P97801 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.3■□□□□ 0.2
Smn1P97801 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smn1P97801 Rarb-207ENSMUST00000225921 2756 ntBASIC16.3■□□□□ 0.2
Smn1P97801 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Smn1P97801 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.29■□□□□ 0.2
Smn1P97801 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smn1P97801 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Smn1P97801 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smn1P97801 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smn1P97801 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.28■□□□□ 0.2
Smn1P97801 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smn1P97801 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Smn1P97801 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Smn1P97801 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smn1P97801 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smn1P97801 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smn1P97801 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smn1P97801 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.27■□□□□ 0.19
Smn1P97801 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.27■□□□□ 0.19
Smn1P97801 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Smn1P97801 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smn1P97801 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smn1P97801 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.26■□□□□ 0.19
Smn1P97801 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smn1P97801 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smn1P97801 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.25■□□□□ 0.19
Smn1P97801 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smn1P97801 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms