Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.23■□□□□ 0.67
Smad4P97471 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.23■□□□□ 0.67
Smad4P97471 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smad4P97471 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.23■□□□□ 0.67
Smad4P97471 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smad4P97471 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.22■□□□□ 0.67
Smad4P97471 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smad4P97471 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smad4P97471 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smad4P97471 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smad4P97471 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smad4P97471 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smad4P97471 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smad4P97471 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smad4P97471 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smad4P97471 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smad4P97471 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 Gm27741-201ENSMUST00000185060 237 ntBASIC19.2■□□□□ 0.66
Smad4P97471 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smad4P97471 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smad4P97471 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.2■□□□□ 0.66
Smad4P97471 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smad4P97471 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.18■□□□□ 0.66
Smad4P97471 Gm30025-201ENSMUST00000218555 728 ntBASIC19.18■□□□□ 0.66
Smad4P97471 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smad4P97471 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smad4P97471 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smad4P97471 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.17■□□□□ 0.66
Smad4P97471 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smad4P97471 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smad4P97471 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smad4P97471 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smad4P97471 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smad4P97471 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.16■□□□□ 0.66
Smad4P97471 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.16■□□□□ 0.66
Smad4P97471 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smad4P97471 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Gm6659-201ENSMUST00000174752 547 ntBASIC19.15■□□□□ 0.66
Smad4P97471 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.15■□□□□ 0.66
Smad4P97471 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smad4P97471 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Smad4P97471 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smad4P97471 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smad4P97471 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smad4P97471 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Smad4P97471 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms