Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim43bP86448 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim43bP86448 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.5■□□□□ 0.71
Trim43bP86448 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Trim43bP86448 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim43bP86448 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim43bP86448 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.5■□□□□ 0.71
Trim43bP86448 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Trim43bP86448 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.5■□□□□ 0.71
Trim43bP86448 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43bP86448 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.49■□□□□ 0.71
Trim43bP86448 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim43bP86448 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim43bP86448 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim43bP86448 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim43bP86448 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim43bP86448 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Trim43bP86448 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.49■□□□□ 0.71
Trim43bP86448 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.49■□□□□ 0.71
Trim43bP86448 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim43bP86448 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43bP86448 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.48■□□□□ 0.71
Trim43bP86448 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trim43bP86448 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43bP86448 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim43bP86448 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.47■□□□□ 0.71
Trim43bP86448 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.47■□□□□ 0.71
Trim43bP86448 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trim43bP86448 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43bP86448 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.47■□□□□ 0.71
Trim43bP86448 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.46■□□□□ 0.71
Trim43bP86448 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.46■□□□□ 0.71
Trim43bP86448 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43bP86448 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim43bP86448 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim43bP86448 Spcs1-204ENSMUST00000226782 949 ntBASIC19.45■□□□□ 0.7
Trim43bP86448 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim43bP86448 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trim43bP86448 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trim43bP86448 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim43bP86448 Rarb-207ENSMUST00000225921 2756 ntBASIC19.44■□□□□ 0.7
Trim43bP86448 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim43bP86448 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim43bP86448 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.44■□□□□ 0.7
Trim43bP86448 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim43bP86448 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms