Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Traf6P70196 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Traf6P70196 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Spcs1-204ENSMUST00000226782 949 ntBASIC18.68■□□□□ 0.58
Traf6P70196 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Traf6P70196 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Traf6P70196 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Traf6P70196 Gm12821-201ENSMUST00000120022 600 ntBASIC18.67■□□□□ 0.58
Traf6P70196 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Traf6P70196 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.67■□□□□ 0.58
Traf6P70196 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.67■□□□□ 0.58
Traf6P70196 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Traf6P70196 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Traf6P70196 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Traf6P70196 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Traf6P70196 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Traf6P70196 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.66■□□□□ 0.58
Traf6P70196 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.66■□□□□ 0.58
Traf6P70196 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Traf6P70196 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.66■□□□□ 0.58
Traf6P70196 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Traf6P70196 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Traf6P70196 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.65■□□□□ 0.58
Traf6P70196 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Traf6P70196 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Traf6P70196 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Traf6P70196 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Traf6P70196 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.65■□□□□ 0.58
Traf6P70196 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Traf6P70196 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Traf6P70196 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
Traf6P70196 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Traf6P70196 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Traf6P70196 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
Traf6P70196 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Traf6P70196 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Traf6P70196 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Traf6P70196 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Traf6P70196 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Traf6P70196 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.63■□□□□ 0.57
Traf6P70196 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.63■□□□□ 0.57
Traf6P70196 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.63■□□□□ 0.57
Traf6P70196 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.63■□□□□ 0.57
Traf6P70196 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Traf6P70196 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Traf6P70196 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Traf6P70196 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Traf6P70196 Rarb-207ENSMUST00000225921 2756 ntBASIC18.62■□□□□ 0.57
Traf6P70196 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms