Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.69■□□□□ 0.26
Sec61a1P61620 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.69■□□□□ 0.26
Sec61a1P61620 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sec61a1P61620 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sec61a1P61620 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sec61a1P61620 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sec61a1P61620 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sec61a1P61620 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a1P61620 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a1P61620 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.68■□□□□ 0.26
Sec61a1P61620 Serp2-204ENSMUST00000228055 705 ntBASIC16.68■□□□□ 0.26
Sec61a1P61620 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sec61a1P61620 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a1P61620 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.68■□□□□ 0.26
Sec61a1P61620 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a1P61620 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.68■□□□□ 0.26
Sec61a1P61620 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sec61a1P61620 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sec61a1P61620 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sec61a1P61620 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Sec61a1P61620 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.67■□□□□ 0.26
Sec61a1P61620 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sec61a1P61620 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Mir7075-201ENSMUST00000184187 82 ntBASIC16.66■□□□□ 0.26
Sec61a1P61620 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.66■□□□□ 0.26
Sec61a1P61620 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sec61a1P61620 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.65■□□□□ 0.26
Sec61a1P61620 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Sec61a1P61620 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a1P61620 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.65■□□□□ 0.26
Sec61a1P61620 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sec61a1P61620 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Sec61a1P61620 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sec61a1P61620 Gm6139-201ENSMUST00000079261 882 ntBASIC16.64■□□□□ 0.25
Sec61a1P61620 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.64■□□□□ 0.25
Sec61a1P61620 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a1P61620 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sec61a1P61620 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Sec61a1P61620 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.63■□□□□ 0.25
Sec61a1P61620 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms